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Nonprofit software

Why Nonprofits Are Leaving PayPal: 7 Reasons + 8 Real Stories

April 21, 2026
TL;DR — The Short Answer

Verdict: PayPal isn't built for nonprofits — and the costs go well beyond the 1.99% + $0.49 per-transaction fee. Zeffy is the only platform with zero fees, built-in fundraising tools, and no account freeze risk.

What works: Switching to a purpose-built platform eliminates fees, embeddable form friction, and donor communication gaps all at once.

What doesn't: Staying on PayPal because it's familiar — the 8 organizations below lost thousands before making the switch.

Best for: Nonprofits of any size that are tired of losing mission dollars to processing fees, patchwork tools, or frozen accounts.

Worth considering if: You've ever had a PayPal account flagged, a donation delayed, or a donor confused about where their gift went through PayPal Giving Fund.

Table of contents

For many nonprofits, PayPal is the default. It's familiar. Trusted. "Good enough." But what if that familiarity is costing your mission hundreds — even thousands — every month? These eight organizations all started on PayPal. Then they ran the numbers, saw the impact of donation fees, and made a change. Here's what they gained by switching to Zeffy, the only 100% free fundraising platform built for nonprofits.

Why nonprofits are leaving PayPal

PayPal processes billions of dollars in transactions every year. For a long time, it was many nonprofits' default answer to "how do we accept donations online?" But that's changing. Across the sector, organizations are actively searching for alternatives — and the reasons go well beyond fees.

The seven frustrations below are the most common drivers pushing nonprofits toward purpose-built platforms. They explain the "why" behind the eight real stories that follow.

Why is PayPal bad for nonprofits?

PayPal was built for e-commerce and peer-to-peer payments. Charitable fundraising was never the core use case, and that mismatch shows up in nearly every layer of the product: how it handles campaign donation spikes, how it routes gifts through intermediary entities, how it supports (or doesn't support) donor relationships, and how it responds when something goes wrong. The seven problems below are the most documented and most costly for nonprofits of any size.

Transaction fees that compound quickly

PayPal charges nonprofits a discounted rate of 1.99% + $0.49 per transaction through its charitable giving program. That sounds manageable until you do the math. On a $50 donation, you lose $1.49 — nearly 3% of the gift. And that's assuming every donor qualifies for the discounted rate. Standard business account rates run 3.49% + $0.49, which many nonprofits unknowingly end up paying.

Fees are a top reason nonprofits leave — but they're rarely the only one. For the full fee breakdown and a free PayPal fee calculator, see How much does PayPal charge nonprofits?

Can PayPal freeze a nonprofit account?

Yes — and this is the issue that generates the most alarming stories in nonprofit communities. PayPal's fraud detection algorithms flag unusual activity — and fundraising campaigns, by nature, produce exactly that: a spike in small donations from many new donors in a short window.

The result is accounts frozen without warning, funds held for up to 180 days, and zero clarity on when or whether the money will be released. Reddit forums and nonprofit Facebook groups are filled with organizations describing the moment they discovered their campaign funds were locked — often mid-campaign, during a giving season, or right before a critical program deadline.

The PayPal 180-day hold problem

The core problem is structural. PayPal's risk models were built for e-commerce and peer-to-peer payments, not charitable fundraising. A successful Giving Tuesday campaign looks almost identical to a fraud pattern from PayPal's perspective. Organizations have no dedicated escalation path and no way to proactively flag their account as a fundraising nonprofit before a campaign launches.

For small nonprofits without cash reserves, a 180-day hold isn't just an inconvenience. It can mean missing payroll, canceling programs, or defaulting on vendor contracts. The PayPal 180-day hold problem is documented extensively in nonprofit communities, and it's one of the clearest signs that PayPal was never designed with charitable organizations in mind.

PayPal Giving Fund problems

PayPal Giving Fund (PPGF) is a separate 501(c)(3) that acts as an intermediary between donors and nonprofits. When a donor gives through PPGF — including through Facebook fundraisers powered by PayPal — the donation technically goes to PayPal Giving Fund first. PayPal Giving Fund then decides when and whether to disburse it to the intended nonprofit.

Disbursements can be delayed by months. If a nonprofit hasn't enrolled in PPGF or doesn't meet its requirements, donations can be redirected to different organizations entirely — without the donor's knowledge. Donors believe they're supporting a specific cause while their contributions are quietly rerouted.

PayPal Giving Fund lawsuit

In 2017, a class-action lawsuit was filed against PayPal Giving Fund, alleging that donations were misappropriated and donor intent was routinely undermined. NPR and other outlets have reported on the ongoing transparency problems with PPGF's disbursement practices. Charity compliance researchers have flagged that the intermediary model creates a meaningful gap between donor intent and actual fund delivery.

The deeper issue is that nonprofits have very little recourse when PPGF holds or redirects funds. The organization receiving the donation has no contractual relationship with the donor — PPGF does. That means disputes, delays, and misdirected gifts are largely outside the nonprofit's control.

No donor communication or relationship tools

PayPal is a payment processor. It was never built for fundraising. There are no built-in tools for donor acknowledgment beyond a basic receipt, no recurring giving management dashboard, no donor profiles, and no way to segment your audience for follow-up campaigns.

Nonprofits that rely on donor retention — which is every sustainable nonprofit — find themselves exporting data and patching together third-party tools just to say thank you effectively. That means paying for an email platform, a CRM, and possibly an event tool on top of PayPal's fees. The total cost of running on PayPal is always higher than the transaction fee line suggests.

No embeddable donation forms

Want to keep donors on your website during the giving process? PayPal makes that difficult. Standard PayPal donation buttons redirect donors away from your site and onto PayPal's platform. That breaks the experience, introduces friction, and increases abandonment.

Off-site redirects during checkout are widely associated with higher abandonment rates — for nonprofits running campaigns where every donor counts, that friction is a meaningful loss. Todd Childers of Mission Link International specifically cited embeddable forms as a deciding factor when he switched — PayPal's inability to embed a giving form on his organization's website was limiting his fundraising before a donor ever clicked "give."

Poor nonprofit-specific customer support

When something goes wrong — a frozen account, a misdirected donation, a dispute — nonprofits report facing the same generic support queue as individual sellers and small businesses. There's no dedicated nonprofit support line, no assigned account manager, and resolution timelines that can stretch weeks while program dollars sit inaccessible.

For organizations running time-sensitive campaigns or depending on specific disbursement windows to fund programs, waiting weeks for a resolution isn't acceptable. The lack of nonprofit-specific support is especially painful because the issues nonprofits face — campaign spikes, seasonal donation patterns, Giving Fund disbursement questions — require context that a general-purpose support agent typically doesn't have.

Missing infrastructure for serious fundraising

Beyond payments, modern nonprofits need tools: event registration, peer-to-peer fundraising, grant tracking, campaign analytics, CRM integrations, and tax receipt automation. PayPal offers none of these.

Organizations that start with PayPal because it's familiar often find themselves building a patchwork of subscriptions to fill the gaps — paying for tools that a purpose-built fundraising platform would include by default. The total cost in money and staff time adds up quickly. As you'll see in the eight stories below, the switch to a purpose-built platform doesn't just save on transaction fees. It recovers hours of administrative work every week.

Is PayPal safe for nonprofits?

PayPal is a legitimate payment processor with broad consumer trust — but for nonprofits specifically, it carries risks that don't apply to standard e-commerce users. Account freeze risk during campaigns is the most acute: a successful fundraising push can trigger fraud detection and lock funds for up to 180 days. PayPal Giving Fund's intermediary structure introduces a second layer of risk, where donations may be delayed or redirected without the nonprofit's knowledge or control. And when problems arise, there is no dedicated nonprofit support channel with the context to resolve them quickly.

For nonprofits that depend on consistent, timely access to their funds — particularly those running seasonal campaigns, operating without cash reserves, or relying on disbursement windows to fund programs — those risks deserve serious weight before treating PayPal as a default fundraising tool.

When PayPal still makes sense

Balanced expertise means acknowledging what PayPal does well. For some organizations, it's still a reasonable tool.

If your nonprofit is brand new and processing fewer than a dozen donations per month, PayPal's familiarity and low setup friction can make it a reasonable starting point. It also works for international peer-to-peer payments in situations where dedicated fundraising platforms don't support the recipient country's currency or banking infrastructure. And if a donor specifically wants to give via their existing PayPal balance, accepting that payment method alongside a primary platform is perfectly reasonable.

The problem isn't PayPal existing. The problem is treating it as a fundraising platform when it's a payment processor. Once your organization is running campaigns, managing recurring donors, or processing more than a few thousand dollars per year, the limitations start costing more than the convenience is worth.

PayPal vs. Zeffy: a quick look

The differences between PayPal and Zeffy come down to one fundamental question: was this tool built for nonprofits? PayPal is a general-purpose payment processor; Zeffy is purpose-built for charitable organizations, with zero fees, embedded forms, donor management, and dedicated support included by default.

See the full PayPal vs. Zeffy comparison

The eight organizations below didn't need a comparison table to make the decision. They needed their account unfrozen, their donors retained, and their program dollars protected. Here's what happened when they switched.

8 Nonprofits that Ditched PayPal for Zeffy

1. The Dearborn Educational Foundation

We are able to give 100% of funds raised back out as well as cut back on administrative duties. Zeffy has helped with using Excel to keep track of registrations for events and allows less data entry into QuickBooks.
— Chastity Townsend, Executive Director

Read the full Dearborn Education Foundation case study

2. Pan American Medical Association

Zeffy's cost-effective platform empowered us to turn limited resources into tangible results, making meaningful strides in addressing healthcare disparities on a global scale.
— Uriel Ramirez, PAMA

Read the full Pan American Medical Association case study

Calculate your potential savings

3. True Blue 1881

With these savings, we can pay rent, feed students, and cover outstanding balances. Every bit of savings goes straight to supporting our students.
— Tiomb O'Rourke

Read the full True Blue 1881 case study

4. Autism Meets Faith

By eliminating fees, Zeffy has allowed us to maximize every donation and focus on expanding our programs. It's opened new revenue streams and empowered us to make an even bigger impact for the children and families we serve.
— Holly Odogwu, Founder & CEO

Read the full Autism Meets Faith case study

5. Si Se Puede Foundation

[Zeffy is] easy to use and is very effective. Our organization has greatly benefited from using Zeffy. It makes it more likely for donors to donate because they know how much of their donation actually gets to the organization.
— Faridodin "Fredi" Lajvardi, Si Se Puede Foundation leader

Read the full Si Se Puede Foundation case study

6. Mission Link International

Unlike PayPal, Zeffy allows the creation of interactive, detailed forms for numerous campaigns. We can embed them on our website's giving page or as Pop-Up forms.
— Todd Childers, Mission Link International Leader

Read the full Mission Link International case study

7. The Sacred Portion Children's Outreach

No more fees, easier to manage, more features, and we loved that we could send a fun and personalized form to our donors who love to know the story behind what we're doing.
— Brynne Spicer, Sacred Portion Children's Outreach Leader

Read the full Sacred Portion Children's Outreach case study

8. Hope Always Foundation

I honestly shout about Zeffy from the rooftops to other nonprofits, because they're literally losing money going anywhere else. I can't express the pleasure it's been to work with a financial platform that doesn't view you as an 'account'.
— Bobby Kesselman, Hope Always Foundation Founder

Read the full Hope Always Foundation case study

Still using PayPal? You might be losing more than just money

These eight organizations discovered what thousands of nonprofits already know: processing fees aren't just a line item on your budget — they're meals not served, students not supported, and families not helped.

From Dearborn Education Foundation's $2,812 in saved fees funding more student programs, to Sacred Portion's $9,350 going directly to vulnerable children, the pattern is clear. Every dollar lost to processing fees is a dollar taken from your mission.

The nonprofits in these stories aren't special. They're not tech-savvy or particularly business-minded. They're organizations just like yours that realized PayPal's familiarity was costing them too much. They made a simple switch to Zeffy — the only 100% free fundraising platform built specifically for nonprofits — and immediately started directing more resources toward their actual work.

Your donors give because they believe in your cause. Keep every dollar they raise with zero platform, transaction, or credit card fees. Funded entirely by optional donor tips.

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FAQs

Why are nonprofits leaving PayPal?

The most common reasons are transaction fees (1.99% + $0.49 per transaction, or higher on standard accounts), account freezes triggered by campaign donation spikes, PayPal Giving Fund disbursement problems, missing donor relationship tools, and the inability to embed donation forms directly on a nonprofit's website.

Can PayPal freeze a nonprofit account?

Yes. PayPal's fraud detection algorithms flag unusual activity, and fundraising campaigns — which generate spikes in small donations from new donors — often match fraud patterns. Accounts can be frozen without warning and funds held for up to 180 days, with no dedicated nonprofit escalation path.

What is PayPal Giving Fund and why is it a problem?

PayPal Giving Fund is a separate 501(c)(3) that acts as an intermediary between donors and nonprofits. Donations go to PPGF first, not directly to the intended organization. Disbursements can be delayed by months, and if a nonprofit isn't enrolled, donations can be redirected to other organizations without the donor's knowledge. A 2017 class-action lawsuit alleged that donor intent was systematically undermined by this structure.

What are PayPal's nonprofit fees?

PayPal's discounted nonprofit rate is 1.99% + $0.49 per transaction for enrolled 501(c)(3) organizations. The standard business rate is 3.49% + $0.49, which nonprofits can end up paying if they're not properly enrolled or if a transaction doesn't qualify for the discounted rate.

Is PayPal safe for nonprofits?

PayPal is a legitimate payment processor, but it carries specific risks for nonprofits: account freeze risk during campaigns, Giving Fund intermediary issues, and no dedicated nonprofit support. Organizations that depend on consistent, timely access to their funds should consider those risks carefully.

What are the best PayPal alternatives for nonprofits?

Zeffy is the only 100% free platform built specifically for nonprofits. It charges zero fees on donations, events, memberships, and peer-to-peer campaigns, and includes built-in donor management, embeddable forms, and tax receipts. Over 100,000 nonprofits have raised $2B+ through Zeffy with $0 in platform fees.

What's the difference between PayPal and PayPal Giving Fund?

PayPal is the payment processor. PayPal Giving Fund is a separate nonprofit entity that collects donations on behalf of other nonprofits and then disburses them — on its own timeline, and only to organizations that meet its enrollment requirements. They operate independently, which is why donations made through PPGF-powered channels don't always reach the intended organization quickly or at all.

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Effort :
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Fun :
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Insights from over $100M in monthly transactions

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  • Look for people who attend related events, follow relevant Facebook groups, or subscribe to aligned newsletters.These aren’t just potential donors—they’re your future advocates.
  • Look for people who attend related events, follow relevant Facebook groups, or subscribe to aligned newsletters.These aren’t just potential donors—they’re your future advocates.

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How Loose Ends turned fee savings into mission impact
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